model

Class FileNode

java.lang.Object

model.Node

model.FileNode

All Implemented Interfaces:

ContextElement, FileInterface, NodeInterface, OperationElement

public class FileNode
extends Node
implements FileInterface

Field Summary

Fields

Modifier and Type	Field and Description
static java.lang.String	type

Constructor Summary

Constructors

Constructor and Description
FileNode(Node parent)

Method Summary

Modifier and Type	Method and Description
void	accept(Operation operation) Accept.
static int	countOccurrences(java.lang.String haystack, char needle)
static java.lang.String	debug(java.lang.String path)
java.lang.String	getCellROIPath()
java.lang.String	getChannel()
java.lang.String	getExtension()
java.util.ArrayList<FieldOfView>	getFieldOfView()
java.lang.String	getFilename()
java.lang.String	getFoVName()
ij.ImagePlus	getImage()
int	getNumberOfFoV()
java.lang.String	getOutputFolder()
java.util.ArrayList<Sample>	getSamples()
java.util.ArrayList<java.lang.String>	getTags() Get all the tags that are assigned to this file node.
static void	main(java.lang.String[] args)
java.lang.String	toString()

Methods inherited from class model.Node

addProperty, addTag, getBeamProfile, getBeamProfileAsImage, getChildren, getChildren, getContext, getDescendents, getExperimentName, getExperimentType, getFieldOfViewName, getFile, getFolder, getName, getParent, getParentFolder, getPath, getProperties, getProperty, getSampleName, getType, setCellROIPath, setParent, setProperty, setTags, setType

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

type

public static final java.lang.String type

See Also:

Constant Field Values

Constructor Detail

FileNode

public FileNode(Node parent)

Method Detail

accept

public void accept(Operation operation)

Description copied from interface: OperationElement

Accept.

Specified by:

accept in interface OperationElement

Parameters:

operation - the operation

toString

public java.lang.String toString()

Overrides:

toString in class Node

getOutputFolder

public java.lang.String getOutputFolder()

Overrides:

getOutputFolder in class Node

getChannel

public java.lang.String getChannel()

Overrides:

getChannel in class Node

getFoVName

public java.lang.String getFoVName()

getNumberOfFoV

public int getNumberOfFoV()

Specified by:

getNumberOfFoV in interface NodeInterface

getImage

public ij.ImagePlus getImage()

getFieldOfView

public java.util.ArrayList<FieldOfView> getFieldOfView()

Specified by:

getFieldOfView in interface NodeInterface

getSamples

public java.util.ArrayList<Sample> getSamples()

Specified by:

getSamples in interface NodeInterface

countOccurrences

public static int countOccurrences(java.lang.String haystack,
                                   char needle)

getCellROIPath

public java.lang.String getCellROIPath()

Overrides:

getCellROIPath in class Node

getFilename

public java.lang.String getFilename()

getExtension

public java.lang.String getExtension()

getTags

public java.util.ArrayList<java.lang.String> getTags()

Get all the tags that are assigned to this file node. A tag is defined as '_tagname'. A file node can have multiple tags, e.g. file_tag1_tag2_tag3.tif.

Specified by:

getTags in interface FileInterface

Overrides:

getTags in class Node

Returns:

Tags that are assigned to this file node (which is specified by the filename)

main

public static void main(java.lang.String[] args)

debug

public static java.lang.String debug(java.lang.String path)