test

Class TestPlugInFilter

java.lang.Object

test.TestPlugInFilter

public class TestPlugInFilter
extends java.lang.Object

The Class TestPlugInFilter.

Constructor Summary

Constructors

Constructor and Description
TestPlugInFilter()

Method Summary

Modifier and Type	Method and Description
static void	drawGaussian(ij.process.ImageProcessor ip, int x0, int y0, double A, double s) Draw gaussian.
static void	drawRandomGaussians(ij.ImagePlus imp, int n, double A, double s) Draw random gaussians.
static java.util.ArrayList<ij.gui.Roi>	findPeaks(PeakFinder finder, ij.ImagePlus imp) Find peaks.
static double	gaussian(double x, double y, double A, double s) Gaussian.
static void	main(java.lang.String[] args) The main method.
static void	runPlugInFilter(ij.plugin.filter.PlugInFilter filter, ij.ImagePlus imp) Run plug in filter.
static void	runPlugInFilter(ij.plugin.filter.PlugInFilter filter, ij.process.ImageProcessor ip) Run plug in filter.
static void	saveRoisAsZip(java.util.ArrayList<ij.gui.Roi> rois, java.lang.String filename) Save rois as zip.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

TestPlugInFilter

public TestPlugInFilter()

Method Detail

gaussian

public static double gaussian(double x,
                              double y,
                              double A,
                              double s)

Gaussian.

Parameters:

x - the x

y - the y

A - the a

s - the s

Returns:

the double

drawGaussian

public static void drawGaussian(ij.process.ImageProcessor ip,
                                int x0,
                                int y0,
                                double A,
                                double s)

Draw gaussian.

Parameters:

ip - the ip

x0 - the x0

y0 - the y0

A - the a

s - the s

drawRandomGaussians

public static void drawRandomGaussians(ij.ImagePlus imp,
                                       int n,
                                       double A,
                                       double s)

Draw random gaussians.

Parameters:

imp - the imp

n - the n

A - the a

s - the s

runPlugInFilter

public static void runPlugInFilter(ij.plugin.filter.PlugInFilter filter,
                                   ij.ImagePlus imp)

Run plug in filter.

Parameters:

filter - the filter

imp - the imp

runPlugInFilter

public static void runPlugInFilter(ij.plugin.filter.PlugInFilter filter,
                                   ij.process.ImageProcessor ip)

Run plug in filter.

Parameters:

filter - the filter

ip - the ip

findPeaks

public static java.util.ArrayList<ij.gui.Roi> findPeaks(PeakFinder finder,
                                                        ij.ImagePlus imp)

Find peaks.

Parameters:

finder - the finder

imp - the imp

Returns:

the array list

saveRoisAsZip

public static void saveRoisAsZip(java.util.ArrayList<ij.gui.Roi> rois,
                                 java.lang.String filename)
                          throws java.io.IOException

Save rois as zip.

Parameters:

rois - the rois

filename - the filename

Throws:

java.io.IOException - Signals that an I/O exception has occurred.

main

public static void main(java.lang.String[] args)

The main method.

Parameters:

args - the arguments