Hierarchy For All Packages

Package Hierarchies:

• analysis,
• context,
• data.stepFitter,
• filters,
• gui,
• imageOperations,
• iSBatch,
• macros,
• model,
• model.database,
• model.parameters,
• model.roi,
• operations,
• operations.cellIntensity,
• operations.cellOutlines,
• operations.cellularConcentration,
• operations.changePoint,
• operations.correlation,
• operations.diffusion,
• operations.flatImages,
• operations.focusLifetime,
• operations.locationMaps,
• operations.macro,
• operations.microbeTrackerIO,
• operations.peakFinder,
• operations.peakFitter,
• operations.tracking,
• process,
• table,
• test,
• tree,
• util,
• utils

Class Hierarchy

• java.lang.Object
  • java.util.AbstractCollection<E> (implements java.util.Collection<E>)
    • java.util.AbstractList<E> (implements java.util.List<E>)
      • table.ResultsTableList
  • model.AbstractTreeModel (implements javax.swing.tree.TreeModel)
  • operations.AddNodeOperation (implements operations.Operation)
  • test.AskFileChooserTest
  • process.BackgroundRemover (implements ij.gui.DialogListener, ij.plugin.filter.ExtendedPlugInFilter)
  • model.roi.backgroundROI
  • operations.cellIntensity.CellIntensity (implements operations.Operation, ij.plugin.PlugIn)
  • operations.cellOutlines.CellOutlines (implements operations.Operation)
  • operations.microbeTrackerIO.CellROI
  • operations.cellularConcentration.CellularConcentration (implements operations.Operation)
  • model.roi.cellularROI
  • operations.changePoint.ChangePoint (implements operations.Operation)
  • filters.ChannelFilter (implements filters.NodeFilterInterface)
  • java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • java.awt.Container
      • javax.swing.JComponent (implements java.io.Serializable)
        • javax.swing.AbstractButton (implements java.awt.ItemSelectable, javax.swing.SwingConstants)
          • javax.swing.JButton (implements javax.accessibility.Accessible)
            • gui.OperationButton (implements java.awt.event.ActionListener, context.ContextListener)
        • gui.CodeTextPane (implements javax.swing.event.DocumentListener, java.lang.Runnable)
        • javax.swing.JLabel (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          • javax.swing.tree.DefaultTreeCellRenderer (implements javax.swing.tree.TreeCellRenderer)
            • gui.DatabaseTreeCellRenderer
        • javax.swing.JPanel (implements javax.accessibility.Accessible)
          • gui.LogPanel (implements java.awt.event.ActionListener)
        • analysis.Plot (implements java.awt.event.ActionListener)
      • java.awt.Window (implements javax.accessibility.Accessible)
        • java.awt.Dialog
          • ij.gui.GenericDialog (implements java.awt.event.ActionListener, java.awt.event.AdjustmentListener, java.awt.event.FocusListener, java.awt.event.ItemListener, java.awt.event.KeyListener, java.awt.event.TextListener, java.awt.event.WindowListener)
            • util.SMBGenericDialog
          • javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • operations.cellularConcentration.CellularConcentrationGUI (implements java.awt.event.ActionListener)
            • operations.changePoint.ChangePointGUI (implements java.awt.event.ActionListener)
            • gui.ChannelsDialog (implements java.awt.event.ActionListener)
            • operations.peakFitter.CopyOfPeakFitterGui (implements java.awt.event.ActionListener)
            • operations.correlation.CorrelationOperationGui (implements java.awt.event.ActionListener)
            • gui.DatabaseDialog (implements java.awt.event.ActionListener)
            • operations.diffusion.DiffusionOperationGUI (implements java.awt.event.ActionListener)
            • gui.ExperimentDialog (implements java.awt.event.ActionListener)
            • gui.FieldOfViewDialog (implements java.awt.event.ActionListener)
            • gui.FileDialog (implements java.awt.event.ActionListener)
            • gui.FileSelectionDialog (implements java.awt.event.ActionListener)
            • operations.peakFinder.FindPeaksGui (implements java.awt.event.ActionListener)
            • operations.peakFitter.FitPeaksOperationGUI (implements java.awt.event.ActionListener)
            • operations.focusLifetime.FocusLifetimeGUI (implements java.awt.event.ActionListener)
            • operations.locationMaps.LocationMapsGui (implements java.awt.event.ActionListener)
            • gui.MacroDialog (implements java.awt.event.ActionListener)
            • macros.MacroDialog2 (implements java.awt.event.ActionListener, java.lang.Runnable)
            • operations.macro.MacroOperationGUI (implements java.awt.event.ItemListener)
            • operations.microbeTrackerIO.MicrobeTrackerIOGui (implements java.awt.event.ActionListener)
            • gui.RunMacroDialog (implements java.awt.event.ActionListener, java.lang.Runnable)
            • gui.SampleDialog (implements java.awt.event.ActionListener)
            • operations.flatImages.SetBackgroundGui (implements java.awt.event.ActionListener)
            • operations.tracking.TrackingGUI (implements java.awt.event.ActionListener)
        • java.awt.Frame (implements java.awt.MenuContainer)
          • javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • gui.AboutPanel
            • test.MessageDialogFrame
    • data.stepFitter.Plot (implements java.lang.Runnable)
  • context.ContextHandler
  • operations.focusLifetime.CopyOfFocusLifetimes (implements operations.Operation)
  • operations.CopyOfMacroOperation (implements operations.Operation)
  • operations.tracking.CopyOfTracking (implements operations.Operation)
  • operations.correlation.CorrelationOperation (implements operations.Operation)
  • operations.peakFitter.CropSaveImage
  • model.roi.customROI
  • model.Database
  • model.DatabaseModel (implements javax.swing.tree.TreeModel)
  • utils.DataTable
  • iSBatch.DebugProperties (implements operations.Operation, ij.plugin.PlugIn)
  • operations.diffusion.DiffusioOperation (implements operations.Operation)
  • process.DiscoidalAveragingFilter (implements ij.gui.DialogListener, ij.plugin.filter.ExtendedPlugInFilter)
  • analysis.DriftCorrection (implements java.awt.event.ActionListener, ij.plugin.filter.PlugInFilter)
  • test.EditComboBox
  • utils.EnumUtils
  • utils.FileIOUtils
  • utils.FileNames
  • filters.FilterSet
  • operations.peakFinder.FindPeaksOperation (implements operations.Operation, ij.plugin.PlugIn)
  • operations.peakFitter.FitPeaksOperation (implements operations.Operation)
  • operations.flatImages.FlattenOperation (implements operations.Operation)
  • operations.focusLifetime.FocusLifetimes (implements operations.Operation, ij.plugin.PlugIn)
  • filters.GenericFilter (implements filters.NodeFilterInterface)
  • process.HoughCircles (implements ij.plugin.filter.PlugInFilter)
  • utils.IJUtils
  • filters.ImageFilter (implements filters.NodeFilterInterface)
  • utils.ImageOperations
  • model.database.ImageType
  • model.Importer
  • operations.ImportOperation (implements operations.Operation)
  • iSBatch.ISBatch (implements javax.swing.event.TreeSelectionListener)
  • iSBatch.iSBatchPreferences
  • analysis.LevenbergMarquardt
  • operations.LevenbergMarquardt
  • utils.ListContentsOfZipFile
  • operations.locationMaps.LocationMaps (implements operations.Operation)
  • model.MacroModel
  • operations.MacroOperation (implements operations.Operation)
  • macros.MacroOperation (implements operations.Operation)
  • operations.macro.MacroOperation2 (implements operations.Operation)
  • test.MacroOperationTest (implements java.awt.event.ActionListener, java.lang.Runnable)
  • data.stepFitter.Main (implements java.awt.event.ActionListener)
  • operations.microbeTrackerIO.Main (implements ij.plugin.PlugIn)
  • test.MatFileToROI
  • operations.microbeTrackerIO.MatlabMeshes
  • analysis.MeanSquareDisplacement (implements ij.plugin.PlugIn)
  • analysis.MeanSquareDisplacement2 (implements ij.plugin.PlugIn)
  • operations.microbeTrackerIO.Mesh
  • model.Metadata
  • operations.microbeTrackerIO.MicrobeTrackerIO (implements operations.Operation)
  • utils.ModelUtils
  • process.MovingAverageFilter (implements ij.gui.DialogListener, ij.plugin.filter.PlugInFilter)
  • utils.MultiFilter
  • test.MultiMeasure
  • model.Node (implements context.ContextElement, model.NodeInterface, operations.OperationElement)
    • model.Experiment
    • model.FieldOfView
    • model.FileNode (implements model.FileInterface)
    • model.OperationNode
    • model.Root
    • model.Sample
  • filters.NodeFilter (implements filters.NodeFilterInterface)
  • filters.NodeFilterClass
  • imageOperations.NodeToImageStack
  • operations.OperationRunner (implements java.lang.Runnable)
  • operations.OperationTemplate (implements operations.Operation)
  • analysis.PalmReconstructor (implements ij.plugin.PlugIn)
  • test.parseDouble
  • analysis.ParticleTracker (implements ij.plugin.PlugIn)
  • analysis.PeakFinder (implements ij.gui.DialogListener, ij.plugin.filter.ExtendedPlugInFilter)
  • test.PeakFinderTest
  • analysis.PeakFitter (implements ij.gui.DialogListener, ij.plugin.filter.ExtendedPlugInFilter)
  • operations.peakFitter.PeakFitter2 (implements operations.Operation, ij.plugin.PlugIn)
  • test.PeakFitterTest
  • operations.microbeTrackerIO.Point
  • utils.Projections
  • analysis.ResultsFitter (implements ij.gui.DialogListener, ij.plugin.PlugIn)
  • table.ResultsGroupFilter (implements ij.plugin.PlugIn)
  • table.ResultsTableFilter (implements ij.gui.DialogListener, ij.plugin.PlugIn)
  • table.ResultsTableOpener (implements ij.plugin.PlugIn)
  • test.ResultsTablePlay
  • table.ResultsTablePlotter (implements java.awt.event.ActionListener, ij.plugin.PlugIn)
  • table.ResultsTableSorter (implements ij.plugin.PlugIn)
  • table.ResultsTableUtil
  • table.ResultsTableView (implements java.awt.event.ActionListener, ij.plugin.PlugIn)
  • operations.microbeTrackerIO.ROIBuilder (implements ij.plugin.PlugIn)
  • test.RoiOperations
  • operations.peakFinder.RoisInsideCells
  • utils.RoiUtils
  • operations.flatImages.SetBackGround (implements operations.Operation)
  • test.SplitTest
  • utils.SQLReader
  • data.stepFitter.StepFitter
  • analysis.StepSizeDistribution (implements ij.plugin.PlugIn)
  • utils.StringOperations
  • test.TesteImageProperties
  • test.TestPlugInFilter
  • test.TimeStamp
  • operations.tracking.Tracking (implements operations.Operation, ij.plugin.PlugIn)
  • test.TreeGenerator
  • util.Update (implements ij.plugin.PlugIn)
  • operations.microbeTrackerIO.Vec
    • operations.microbeTrackerIO.Line
      • operations.microbeTrackerIO.Segment

Interface Hierarchy

• context.ContextElement
  • operations.Operation
• context.ContextListener
• model.FileInterface
• filters.NodeFilterInterface
• model.NodeInterface
• operations.OperationElement

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • model.parameters.TableType
    • model.parameters.RoiType
    • model.parameters.NodeType
    • model.parameters.ExperimentType
    • model.parameters.Channel