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G

gaussian(double, double, double, double) - Static method in class test.TestPlugInFilter
Gaussian.
gaussJordan(double[][], double[][]) - Method in class analysis.LevenbergMarquardt
Gauss jordan.
gaussJordan(double[][], double[][]) - Method in class operations.LevenbergMarquardt
Gauss jordan.
generate(String, String, int) - Static method in class test.TreeGenerator
Generate.
GenericFilter - Class in filters
 
GenericFilter(String, String) - Constructor for class filters.GenericFilter
 
GenericFilter(String, ArrayList<String>, String, String) - Constructor for class filters.GenericFilter
 
get(int) - Method in class table.ResultsTableList
Gets the.
getArea() - Method in class operations.microbeTrackerIO.Mesh
Gets the area.
getArguments(String, String) - Static method in class utils.StringOperations
 
getBeamProfile(String) - Method in class model.Experiment
 
getBeamProfile(String) - Method in class model.FieldOfView
 
getBeamProfile(String) - Method in class model.Node
 
getBeamProfile(String) - Method in class model.Sample
 
getBeamProfileAsImage(String) - Method in class model.Node
 
getCell() - Method in class operations.microbeTrackerIO.Mesh
Gets the cell.
getCellROIPath() - Method in class model.FileNode
 
getCellROIPath() - Method in class model.Node
 
getChannel() - Method in class gui.FileSelectionDialog
 
getChannel() - Method in class gui.MacroDialog
Gets the channel.
getChannel() - Method in class model.FileNode
 
getChannel() - Method in class model.Node
 
getChannel() - Method in class operations.cellularConcentration.CellularConcentrationGUI
Gets the channel.
getChannel() - Method in class operations.changePoint.ChangePointGUI
Gets the channel.
getChannel() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the channel.
getChannel() - Method in class operations.flatImages.SetBackgroundGui
Gets the channel.
getChannel() - Method in class operations.focusLifetime.FocusLifetimeGUI
Gets the channel.
getChannel() - Method in class operations.locationMaps.LocationMapsGui
Gets the channel.
getChannel() - Method in class operations.microbeTrackerIO.MicrobeTrackerIOGui
 
getChannel() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getChannel() - Method in class operations.peakFitter.FitPeaksOperationGUI
 
getChannel() - Method in class operations.tracking.TrackingGUI
 
getChannel1() - Method in class operations.correlation.CorrelationOperationGui
Gets the channel1.
getChannel2() - Method in class operations.correlation.CorrelationOperationGui
Gets the channel2.
getChannelFiles(File, ArrayList<File>, String...) - Method in class gui.ChannelsDialog
Gets the channel files.
getChild(Object, int) - Method in class model.DatabaseModel
Gets the child.
getChildCount(Object) - Method in class model.DatabaseModel
Gets the child count.
getChildren(String) - Static method in class model.MacroModel
Gets the children.
getChildren() - Method in class model.Node
 
getChildren(NodeFilterInterface) - Method in class model.Node
 
getChiSquared() - Method in class data.stepFitter.StepFitter
Gets the chi squared.
getContext() - Method in interface context.ContextElement
Gets the context.
getContext() - Method in class iSBatch.DebugProperties
 
getContext() - Method in class macros.MacroOperation
 
getContext() - Method in class model.Node
 
getContext() - Method in class operations.AddNodeOperation
 
getContext() - Method in class operations.cellIntensity.CellIntensity
 
getContext() - Method in class operations.cellOutlines.CellOutlines
Gets the context.
getContext() - Method in class operations.cellularConcentration.CellularConcentration
Gets the context.
getContext() - Method in class operations.changePoint.ChangePoint
Gets the context.
getContext() - Method in class operations.CopyOfMacroOperation
Gets the context.
getContext() - Method in class operations.correlation.CorrelationOperation
Gets the context.
getContext() - Method in class operations.diffusion.DiffusioOperation
Gets the context.
getContext() - Method in class operations.flatImages.FlattenOperation
 
getContext() - Method in class operations.flatImages.SetBackGround
 
getContext() - Method in class operations.focusLifetime.CopyOfFocusLifetimes
Gets the context.
getContext() - Method in class operations.focusLifetime.FocusLifetimes
 
getContext() - Method in class operations.ImportOperation
 
getContext() - Method in class operations.locationMaps.LocationMaps
Gets the context.
getContext() - Method in class operations.macro.MacroOperation2
Gets the context.
getContext() - Method in class operations.MacroOperation
Gets the context.
getContext() - Method in class operations.microbeTrackerIO.MicrobeTrackerIO
 
getContext() - Method in class operations.peakFinder.FindPeaksOperation
 
getContext() - Method in class operations.peakFitter.FitPeaksOperation
 
getContext() - Method in class operations.peakFitter.PeakFitter2
 
getContext() - Method in class operations.tracking.CopyOfTracking
 
getContext() - Method in class operations.tracking.Tracking
 
getContextElement() - Method in class context.ContextHandler
Gets the context element.
getCounterChiSquared() - Method in class data.stepFitter.StepFitter
Gets the counter chi squared.
getCounterStepsX() - Method in class data.stepFitter.StepFitter
Gets the counter steps x.
getCounterStepsY() - Method in class data.stepFitter.StepFitter
Gets the counter steps y.
getCreatedNodes() - Method in class iSBatch.DebugProperties
 
getCreatedNodes() - Method in class macros.MacroOperation
 
getCreatedNodes() - Method in class operations.AddNodeOperation
 
getCreatedNodes() - Method in class operations.cellIntensity.CellIntensity
 
getCreatedNodes() - Method in class operations.cellOutlines.CellOutlines
Gets the created nodes.
getCreatedNodes() - Method in class operations.cellularConcentration.CellularConcentration
Gets the created nodes.
getCreatedNodes() - Method in class operations.changePoint.ChangePoint
Gets the created nodes.
getCreatedNodes() - Method in class operations.CopyOfMacroOperation
Gets the created nodes.
getCreatedNodes() - Method in class operations.correlation.CorrelationOperation
Gets the created nodes.
getCreatedNodes() - Method in class operations.diffusion.DiffusioOperation
Gets the created nodes.
getCreatedNodes() - Method in class operations.flatImages.FlattenOperation
 
getCreatedNodes() - Method in class operations.flatImages.SetBackGround
 
getCreatedNodes() - Method in class operations.focusLifetime.CopyOfFocusLifetimes
Gets the created nodes.
getCreatedNodes() - Method in class operations.focusLifetime.FocusLifetimes
 
getCreatedNodes() - Method in class operations.ImportOperation
 
getCreatedNodes() - Method in class operations.locationMaps.LocationMaps
Gets the created nodes.
getCreatedNodes() - Method in class operations.macro.MacroOperation2
Gets the created nodes.
getCreatedNodes() - Method in class operations.MacroOperation
Gets the created nodes.
getCreatedNodes() - Method in class operations.microbeTrackerIO.MicrobeTrackerIO
 
getCreatedNodes() - Method in interface operations.Operation
 
getCreatedNodes() - Method in class operations.peakFinder.FindPeaksOperation
 
getCreatedNodes() - Method in class operations.peakFitter.FitPeaksOperation
 
getCreatedNodes() - Method in class operations.peakFitter.PeakFitter2
 
getCreatedNodes() - Method in class operations.tracking.CopyOfTracking
 
getCreatedNodes() - Method in class operations.tracking.Tracking
 
getCustom() - Method in class operations.cellularConcentration.CellularConcentrationGUI
Gets the custom.
getCustom() - Method in class operations.changePoint.ChangePointGUI
Gets the custom.
getCustom() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the custom.
getCustom() - Method in class operations.focusLifetime.FocusLifetimeGUI
Gets the custom.
getCustom() - Method in class operations.tracking.TrackingGUI
 
getCustomFilter() - Method in class operations.locationMaps.LocationMapsGui
Gets the custom filter.
getCustomFilter() - Method in class operations.microbeTrackerIO.MicrobeTrackerIOGui
 
getCustomSearch() - Method in class gui.FileSelectionDialog
 
getCustomSearch() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the custom search.
getCustomSearch() - Method in class operations.focusLifetime.FocusLifetimeGUI
Gets the custom search.
getCustomSearch() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getCustomSearch() - Method in class operations.peakFitter.FitPeaksOperationGUI
 
getCustomSearch() - Method in class operations.tracking.TrackingGUI
 
getDatabase() - Method in class gui.DatabaseDialog
Gets the database.
getDescendents(NodeFilterInterface) - Method in class model.Node
 
getDISTANCE_BETWEEN_PEAKS() - Method in class operations.peakFinder.FindPeaksGui
 
getDoAverage() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the do average.
getErrorBaseline() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getErrorHeight() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getErrorSigmaX() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getErrorSigmaY() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getErrorX() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getErrorY() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getExperimentName() - Method in class model.Experiment
 
getExperimentName() - Method in class model.FieldOfView
 
getExperimentName() - Method in class model.Node
 
getExperimentName() - Method in class model.Sample
 
getExperimentType() - Method in class model.FieldOfView
 
getExperimentType() - Method in class model.Node
 
getExperimentType() - Method in class model.Sample
 
getExtension() - Method in class model.FileNode
 
getExtention() - Method in class operations.cellularConcentration.CellularConcentrationGUI
Gets the extention.
getExtention() - Method in class operations.changePoint.ChangePointGUI
Gets the extention.
getExtention() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the extention.
getExtention() - Method in class operations.focusLifetime.FocusLifetimeGUI
Gets the extention.
getExtention() - Method in class operations.tracking.TrackingGUI
 
getFieldOfView() - Method in class model.Experiment
 
getFieldOfView() - Method in class model.FieldOfView
 
getFieldOfView() - Method in class model.FileNode
 
getFieldOfView() - Method in interface model.NodeInterface
 
getFieldOfView() - Method in class model.OperationNode
Gets the field of view.
getFieldOfView() - Method in class model.Root
 
getFieldOfView() - Method in class model.Sample
 
getFieldOfViewName() - Method in class model.FieldOfView
 
getFieldOfViewName() - Method in class model.Node
 
getFile() - Method in class model.Node
 
getFilename() - Method in class model.FileNode
 
getFileNodes() - Method in class gui.FileSelectionDialog
 
getFilter1() - Method in class operations.correlation.CorrelationOperationGui
Gets the filter1.
getFilter2() - Method in class operations.correlation.CorrelationOperationGui
Gets the filter2.
getFitRadius() - Method in class utils.ImageOperations
 
getFitUntil() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the fit until.
getFolder() - Method in class model.Node
 
getFoVName() - Method in class model.FileNode
 
getFwhm() - Method in class utils.ImageOperations
 
getGradient(double[], double[], double[]) - Method in class operations.LevenbergMarquardt
Gets the gradient.
getHeader() - Method in class utils.DataTable
 
getHeaderIndex(String) - Method in class utils.DataTable
 
getImage() - Method in class model.FileNode
 
getImagePath() - Method in class operations.cellularConcentration.CellularConcentrationGUI
Gets the image path.
getImagePath() - Method in class operations.changePoint.ChangePointGUI
Gets the image path.
getImagePath() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the image path.
getImagePath() - Method in class operations.flatImages.SetBackgroundGui
 
getImagePath() - Method in class operations.focusLifetime.FocusLifetimeGUI
Gets the image path.
getImagePath() - Method in class operations.locationMaps.LocationMapsGui
Gets the image path.
getImagePath() - Method in class operations.microbeTrackerIO.MicrobeTrackerIOGui
 
getImagePath() - Method in class operations.peakFinder.FindPeaksGui
 
getImagePath() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getImagePath() - Method in class operations.tracking.TrackingGUI
 
getImagePlus() - Method in class imageOperations.NodeToImageStack
 
getImages() - Method in class model.FieldOfView
 
getImages(String) - Method in class model.FieldOfView
 
getImageTag() - Method in class operations.cellularConcentration.CellularConcentrationGUI
Gets the image tag.
getImageTag() - Method in class operations.changePoint.ChangePointGUI
Gets the image tag.
getImageTag() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the image tag.
getImageTag() - Method in class operations.flatImages.SetBackgroundGui
 
getImageTag() - Method in class operations.focusLifetime.FocusLifetimeGUI
Gets the image tag.
getImageTag() - Method in class operations.microbeTrackerIO.MicrobeTrackerIOGui
 
getImageTag() - Method in class operations.tracking.TrackingGUI
 
getImageType() - Method in class operations.microbeTrackerIO.MicrobeTrackerIOGui
 
getImageType() - Method in class operations.peakFinder.FindPeaksGui
 
getIndexOfChild(Object, Object) - Method in class model.AbstractTreeModel
Gets the index of child.
getIndexOfChild(Object, Object) - Method in class model.DatabaseModel
Gets the index of child.
getINNER_RADIUS() - Method in class operations.peakFinder.FindPeaksGui
 
getInnerRadius() - Method in class operations.peakFinder.FindPeaksGui
 
getInnerRadius() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getInnerRadius() - Method in class utils.ImageOperations
 
getInstance() - Static method in class gui.LogPanel
Gets the single instance of LogPanel.
getInstance() - Static method in class iSBatch.ISBatch
 
getInstance() - Static method in class utils.ImageOperations
 
getINTENSITY_THRESHOLD() - Method in class operations.peakFinder.FindPeaksGui
 
getListeners() - Method in class context.ContextHandler
Gets the listeners.
getLookAhead() - Method in class operations.tracking.TrackingGUI
 
getMacroFilename() - Method in class gui.MacroDialog
Gets the macro filename.
getMagnification() - Method in class utils.ImageOperations
 
getMatFilePath() - Method in class operations.locationMaps.LocationMapsGui
Gets the mat file path.
getMatFilePath() - Method in class operations.microbeTrackerIO.MicrobeTrackerIOGui
 
getMaxError() - Method in class utils.ImageOperations
 
getMaxStepSize() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the max step size.
getMaxStepSize() - Method in class operations.tracking.TrackingGUI
 
getMeshes(File) - Static method in class operations.microbeTrackerIO.MatlabMeshes
Gets the meshes.
getMeshes(String) - Static method in class operations.microbeTrackerIO.MatlabMeshes
Gets the meshes.
getMethod() - Method in class gui.FileSelectionDialog
 
getMethod() - Method in class operations.cellularConcentration.CellularConcentrationGUI
Gets the method.
getMethod() - Method in class operations.changePoint.ChangePointGUI
Gets the method.
getMethod() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the method.
getMethod() - Method in class operations.flatImages.SetBackgroundGui
 
getMethod() - Method in class operations.focusLifetime.FocusLifetimeGUI
Gets the method.
getMethod() - Method in class operations.locationMaps.LocationMapsGui
Gets the method.
getMethod() - Method in class operations.microbeTrackerIO.MicrobeTrackerIOGui
 
getMethod() - Method in class operations.peakFinder.FindPeaksGui
 
getMethod() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getMethod() - Method in class operations.peakFitter.FitPeaksOperationGUI
 
getMethod() - Method in class operations.tracking.TrackingGUI
 
getMinDistance() - Method in class operations.peakFinder.FindPeaksGui
 
getMinDistance() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getMinimumDistance() - Method in class utils.ImageOperations
 
getName() - Method in class iSBatch.DebugProperties
 
getName() - Method in class macros.MacroOperation
 
getName() - Method in class model.Node
 
getName() - Method in class operations.AddNodeOperation
 
getName() - Method in class operations.cellIntensity.CellIntensity
 
getName() - Method in class operations.cellOutlines.CellOutlines
Gets the name.
getName() - Method in class operations.cellularConcentration.CellularConcentration
Gets the name.
getName() - Method in class operations.changePoint.ChangePoint
Gets the name.
getName() - Method in class operations.CopyOfMacroOperation
Gets the name.
getName() - Method in class operations.correlation.CorrelationOperation
Gets the name.
getName() - Method in class operations.diffusion.DiffusioOperation
Gets the name.
getName() - Method in class operations.flatImages.FlattenOperation
 
getName() - Method in class operations.flatImages.SetBackGround
 
getName() - Method in class operations.focusLifetime.CopyOfFocusLifetimes
Gets the name.
getName() - Method in class operations.focusLifetime.FocusLifetimes
 
getName() - Method in class operations.ImportOperation
 
getName() - Method in class operations.locationMaps.LocationMaps
Gets the name.
getName() - Method in class operations.macro.MacroOperation2
Gets the name.
getName() - Method in class operations.MacroOperation
Gets the name.
getName() - Method in class operations.microbeTrackerIO.MicrobeTrackerIO
 
getName() - Method in interface operations.Operation
 
getName() - Method in class operations.peakFinder.FindPeaksOperation
 
getName() - Method in class operations.peakFitter.FitPeaksOperation
 
getName() - Method in class operations.peakFitter.PeakFitter2
 
getName() - Method in class operations.tracking.CopyOfTracking
 
getName() - Method in class operations.tracking.Tracking
 
getNumberOfCols() - Method in class utils.DataTable
 
getNumberOfFoV() - Method in class model.Experiment
 
getNumberOfFoV() - Method in class model.FieldOfView
 
getNumberOfFoV() - Method in class model.FileNode
 
getNumberOfFoV() - Method in interface model.NodeInterface
 
getNumberOfFoV() - Method in class model.OperationNode
Gets the number of fo v.
getNumberOfFoV() - Method in class model.Root
 
getNumberOfFoV() - Method in class model.Sample
 
getNumberOfPoints() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the number of points.
getNumberOfRows() - Method in class utils.DataTable
 
getOperations() - Method in class iSBatch.ISBatch
 
getOUTER_RADIUS() - Method in class operations.peakFinder.FindPeaksGui
 
getOuterRadius() - Method in class operations.peakFinder.FindPeaksGui
 
getOuterRadius() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getOuterRadius() - Method in class utils.ImageOperations
 
getOutline() - Method in class operations.microbeTrackerIO.Mesh
Gets the outline.
getOutputFilename(Node, String, String) - Static method in class utils.FileNames
 
getOutputFolder() - Method in class model.FileNode
 
getOutputFolder() - Method in class model.Node
 
getParameters() - Method in class iSBatch.DebugProperties
 
getParameters() - Method in class macros.MacroOperation
 
getParameters() - Method in class operations.AddNodeOperation
 
getParameters() - Method in class operations.cellIntensity.CellIntensity
 
getParameters() - Method in class operations.cellOutlines.CellOutlines
Gets the parameters.
getParameters() - Method in class operations.cellularConcentration.CellularConcentration
Gets the parameters.
getParameters() - Method in class operations.changePoint.ChangePoint
Gets the parameters.
getParameters() - Method in class operations.CopyOfMacroOperation
Gets the parameters.
getParameters() - Method in class operations.correlation.CorrelationOperation
Gets the parameters.
getParameters() - Method in class operations.diffusion.DiffusioOperation
Gets the parameters.
getParameters() - Method in class operations.flatImages.FlattenOperation
 
getParameters() - Method in class operations.flatImages.SetBackGround
 
getParameters() - Method in class operations.focusLifetime.CopyOfFocusLifetimes
Gets the parameters.
getParameters() - Method in class operations.focusLifetime.FocusLifetimes
 
getParameters() - Method in class operations.ImportOperation
 
getParameters() - Method in class operations.locationMaps.LocationMaps
Gets the parameters.
getParameters() - Method in class operations.macro.MacroOperation2
Gets the parameters.
getParameters() - Method in class operations.MacroOperation
Gets the parameters.
getParameters() - Method in class operations.microbeTrackerIO.MicrobeTrackerIO
 
getParameters() - Method in interface operations.Operation
 
getParameters() - Method in class operations.peakFinder.FindPeaksOperation
 
getParameters() - Method in class operations.peakFitter.FitPeaksOperation
 
getParameters() - Method in class operations.peakFitter.PeakFitter2
 
getParameters() - Method in class operations.tracking.CopyOfTracking
 
getParameters() - Method in class operations.tracking.Tracking
 
getParent(String) - Static method in class model.MacroModel
Gets the parent.
getParent() - Method in class model.Node
 
getParentFolder() - Method in class model.Node
Gets the parent folder.
getPath() - Method in class model.Node
 
getPathToRoot(Node) - Method in class model.DatabaseModel
Gets the path to root.
getPixelSize() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the pixel size.
getPlotBounds() - Method in class data.stepFitter.Plot
Gets the plot bounds.
getProperties(String) - Static method in class model.MacroModel
Gets the properties.
getProperties() - Method in class model.Metadata
Gets the properties.
getProperties() - Method in class model.Node
 
getProperty(String) - Method in class model.Metadata
Gets the property.
getProperty(String) - Method in class model.Node
 
getResults() - Method in class analysis.PeakFitter
 
getResults() - Method in class table.ResultsTableView
Gets the results.
getResultsTable(String) - Static method in class table.ResultsTableUtil
Gets the results table.
getResultsTable() - Method in class utils.DataTable
 
getResultsTableTitles() - Static method in class table.ResultsTableUtil
Gets the results table titles.
getRoi() - Method in class operations.microbeTrackerIO.ROIBuilder
 
getRoiBand(ImagePlus, RoiManager) - Static method in class utils.RoiUtils
 
getRoiBand(int, int, RoiManager, int) - Static method in class utils.RoiUtils
 
getRoiBand(int, int, RoiManager) - Static method in class utils.RoiUtils
 
getRoiBand(ImagePlus, RoiManager, int) - Static method in class utils.RoiUtils
 
getROIManager() - Method in class analysis.PeakFinder
Gets the ROI manager.
getRoot() - Method in class model.Database
Read.
getRoot() - Method in class model.DatabaseModel
Gets the root.
getSampleName() - Method in class model.FieldOfView
 
getSampleName() - Method in class model.Node
 
getSampleName() - Method in class model.Sample
 
getSamples() - Method in class model.Experiment
 
getSamples() - Method in class model.FieldOfView
 
getSamples() - Method in class model.FileNode
 
getSamples() - Method in interface model.NodeInterface
 
getSamples() - Method in class model.OperationNode
Gets the samples.
getSamples() - Method in class model.Root
 
getSamples() - Method in class model.Sample
 
getSegments() - Method in class operations.microbeTrackerIO.Mesh
Gets the segments.
getSelectedChannel() - Method in class operations.peakFinder.FindPeaksGui
 
getSelection(int) - Static method in class test.RoiOperations
 
getSelection(int) - Static method in class utils.RoiUtils
 
getSELECTION_RADIUS() - Method in class operations.peakFinder.FindPeaksGui
 
getSelectionRadius() - Method in class operations.peakFinder.FindPeaksGui
 
getSelectionRadius() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getSlice() - Method in class operations.microbeTrackerIO.Mesh
Gets the slice.
getSNR_THRESHOLD() - Method in class operations.peakFinder.FindPeaksGui
 
getSNRThreshold() - Method in class operations.peakFinder.FindPeaksGui
 
getSNRThreshold() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getStepsX() - Method in class data.stepFitter.StepFitter
Gets the steps x.
getStepsY() - Method in class data.stepFitter.StepFitter
Gets the steps y.
getTableMatrix() - Method in class utils.DataTable
 
getTableRowsInsideCells(Node, String) - Static method in class utils.MultiFilter
 
getTableRowsInsideCells(Node, String, File) - Static method in class utils.MultiFilter
 
getTags() - Method in class gui.FileSelectionDialog
 
getTags() - Method in interface model.FileInterface
 
getTags() - Method in class model.FileNode
Get all the tags that are assigned to this file node.
getTags() - Method in class model.Node
 
getTags() - Method in class operations.cellularConcentration.CellularConcentrationGUI
Gets the tags.
getTags() - Method in class operations.changePoint.ChangePointGUI
Gets the tags.
getTags() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the tags.
getTags() - Method in class operations.flatImages.SetBackgroundGui
 
getTags() - Method in class operations.focusLifetime.FocusLifetimeGUI
Gets the tags.
getTags() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getTags() - Method in class operations.peakFitter.FitPeaksOperationGUI
 
getTags() - Method in class operations.tracking.TrackingGUI
 
getTags(String) - Static method in class utils.FileNames
 
getText() - Method in class gui.CodeTextPane
Gets the text.
getThreshold() - Method in class operations.peakFinder.FindPeaksGui
 
getThreshold() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
getThreshold() - Method in class utils.ImageOperations
 
gettimeInterval() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the time interval.
getTimeInterval() - Method in class operations.diffusion.DiffusionOperationGUI
Gets the time interval.
getTotalLength() - Method in class operations.microbeTrackerIO.Mesh
Gets the total length.
getTreeCellRendererComponent(JTree, Object, boolean, boolean, boolean, int, boolean) - Method in class gui.DatabaseTreeCellRenderer
 
getTreeOperations() - Method in class iSBatch.ISBatch
 
getType(String) - Static method in class model.MacroModel
Gets the type.
getType() - Method in class model.Node
 
gettype1() - Method in class operations.correlation.CorrelationOperationGui
Gets the type1.
gettype2() - Method in class operations.correlation.CorrelationOperationGui
Gets the type2.
getUniqueChannels(ArrayList<Node>) - Static method in class utils.ModelUtils
 
getUniqueChannels(Node) - Static method in class utils.ModelUtils
 
getUniqueChannelsFromDatabase(Node) - Static method in class utils.ModelUtils
 
getUniques(ArrayList<Node>, String) - Static method in class utils.ModelUtils
 
getUniquesExtension(ArrayList<Node>) - Static method in class utils.ModelUtils
 
getUniqueTags(ArrayList<Node>) - Static method in class utils.ModelUtils
 
getValue(double[], double[], double[]) - Method in class analysis.LevenbergMarquardt
Gets the value.
getValue(double[], double[]) - Method in class operations.LevenbergMarquardt
Gets the value.
getVolume() - Method in class operations.microbeTrackerIO.Mesh
Gets the volume.
getZScale() - Method in class operations.peakFitter.CopyOfPeakFitterGui
 
greenRegEx - Static variable in class model.Importer
The Green channel regex.
gui - package gui
 
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